C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 221, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047115 Fam221a 10090 + 6:49367739-49389905 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060561 Fam221a-001 49367739-49389905 protein_coding
  ENSMUST00000121903 Fam221a-002 49367823-49389280 protein_coding
  ENSMUST00000134786 Fam221a-003 49367896-49376242 protein_coding
  ENSMUST00000141910 Fam221a-005 49385252-49389273 retained_intron
  ENSMUST00000142950 Fam221a-004 49378974-49385455 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060561ENSMUST00000121903ENSMUST00000134786ENSMUST00000141910ENSMUST00000142950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060561 0.437±0.29 0.270±0.09 0.605±0.06 0.417±0.33 0.285±0.16 0.842±0.16 0.183±0.12 0.340±0.15 0.502±0.36 2.177±0.51 0.068±0.03 1.476±0.84 0.878±0.61 2.334±1.28
ENSMUST00000121903 0.639±0.30 1.584±0.25 0.873±0.14 0.966±0.09 1.282±0.69 2.541±1.01 0.255±0.17 0.562±0.18 0.632±0.42 5.056±0.78 0.080±0.05 4.439±1.49 2.090±0.84 5.333±2.98
ENSMUST00000134786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.392±0.00 N/A
ENSMUST00000141910 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A 0.628±0.00 N/A 0.147±0.02 0.326±0.00 1.309±0.45 N/A
ENSMUST00000142950 N/A N/A N/A N/A N/A N/A N/A 0.674±0.00 N/A N/A 0.260±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CV CIL_0002CV_0002 CGP 6:49367739-49469501

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027599 fam221a family with sequence similarity 221, member A protein_coding Danio_rerio
ENSG00000188732 FAM221A family with sequence similarity 221, member A protein_coding Homo_sapiens

Loading