C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047409 Ctdspl 10090 + 9:118926453-119043998 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073109 Ctdspl-001 118926453-119043998 protein_coding
  ENSMUST00000172464 Ctdspl-003 118926862-119040649 protein_coding
  ENSMUST00000174132 Ctdspl-002 119033001-119040909 retained_intron
  ENSMUST00000174841 Ctdspl-004 118929867-119033628 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073109ENSMUST00000174132
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073109 13.498±13.28 6.876±2.91 8.551±3.25 4.760±0.13 7.165±3.07 9.010±5.64 1.205±0.30 4.971±2.89 1.390±1.21 13.448±8.47 0.228±0.02 4.995±2.74 15.095±6.16 0.798±0.00
ENSMUST00000174132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.752±0.54 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005VQ CIL_0005VQ_0002 CGP 9:118606690-119043998
CIL_0005AN CIL_0005AN_0002 CGP 9:118926453-119071525

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0003674 ND molecular_function
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005634 IEA nucleus
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome
GO:2000134 IDA negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062116 ctdsplb CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b protein_coding Danio_rerio
ENSDARG00000071673 ctdspla CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a protein_coding Danio_rerio
ENSG00000144677 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like protein_coding Homo_sapiens

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