C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: latexin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047557 Lxn 10090 - 3:67457998-67463926 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058981 Lxn-001 67457998-67463926 protein_coding
  ENSMUST00000160202 Lxn-002 67461061-67463782 retained_intron
  ENSMUST00000160827 Lxn-003 67458001-67461634 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000058981ENSMUST00000160827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000058981 16.453±2.89 44.429±3.54 14.121±1.48 24.476±7.17 22.806±10.07 35.505±9.87 15.455±1.97 3.971±0.00 55.825±10.88 25.924±9.78 19.688±9.36 9.940±4.20
ENSMUST00000160827 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.262±0.00 5.911±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086V CIL_00086V_0002 VISTA 3:66870618-67471970
CIL_0008BM CIL_0008BM_0002 VISTA 3:66890932-67492590
CIL_0008KO CIL_0008KO_0002 VISTA 3:66912683-67513884
CIL_000808 CIL_000808_0002 VISTA 3:67009670-67610443
CIL_000815 CIL_000815_0002 VISTA 3:67040647-67641402
CIL_000937 CIL_000937_0002 VISTA 3:67250193-67852228
CIL_0004JV CIL_0004JV_0003 CGP 3:67374097-67476529
CIL_0004JU CIL_0004JU_0003 CGP 3:67430096-67476529
CIL_0001ZA CIL_0001ZA_0002 CGP 3:67457998-67515523

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006954 IEA inflammatory response
GO:0008191 IMP metalloendopeptidase inhibitor activity
GO:0008201 IEA heparin binding
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0050965 IMP detection of temperature stimulus involved in sensory perception of pain
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043102 lxn latexin protein_coding Danio_rerio
ENSG00000079257 LXN latexin protein_coding Homo_sapiens

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