C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A430005L14 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047613 A430005L14Rik 10090 + 4:153957237-153961925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058393 A430005L14Rik-001 153957237-153961925 protein_coding
  ENSMUST00000105645 A430005L14Rik-201 153957237-153961918 protein_coding
  ENSMUST00000128457 A430005L14Rik-004 153959792-153961089 retained_intron
  ENSMUST00000133524 A430005L14Rik-005 153957329-153960734 processed_transcript
  ENSMUST00000139967 A430005L14Rik-003 153957255-153960066 retained_intron
  ENSMUST00000141493 A430005L14Rik-002 153957266-153961511 protein_coding
  ENSMUST00000147826 A430005L14Rik-006 153957266-153961803 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058393ENSMUST00000105645ENSMUST00000128457ENSMUST00000141493ENSMUST00000147826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058393 9.566±1.94 11.427±2.76 11.941±1.53 9.218±3.22 5.862±2.07 11.154±1.33 6.288±1.17 15.499±2.07 18.430±3.78 8.788±3.57 8.652±1.09 7.481±3.31 12.790±6.94 26.933±11.50
ENSMUST00000105645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.685±0.00 4.366±0.66 4.914±0.02 6.885±0.00
ENSMUST00000128457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.653±0.00 N/A N/A
ENSMUST00000141493 N/A 12.963±3.21 N/A N/A 7.873±2.32 15.049±3.94 N/A 5.918±0.51 11.346±2.51 8.307±0.00 N/A 17.351±7.19 N/A N/A
ENSMUST00000147826 4.700±1.02 4.391±1.66 3.701±1.32 3.672±0.68 4.537±1.96 4.380±1.05 2.446±0.55 4.145±0.57 6.189±2.01 4.156±0.56 2.786±0.30 9.371±4.29 7.130±2.80 8.525±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198912 C1orf174 chromosome 1 open reading frame 174 protein_coding Homo_sapiens

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