C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-X-C motif) receptor 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047880 Cxcr5 10090 - 9:44511788-44556391 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062215 Cxcr5-201 44511788-44526421 protein_coding
  ENSMUST00000179828 Cxcr5-202 44511788-44556391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000062215ENSMUST00000179828
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000062215 0.143±0.07 0.123±0.06 15.446±4.31 1.212±0.25 0.451±0.28 0.650±0.66 0.103±0.09 2.817±0.26 0.115±0.05 0.030±0.02 1.061±0.04
ENSMUST00000179828 N/A 0.095±0.00 2.090±0.00 0.353±0.15 N/A N/A 0.300±0.05 0.300±0.00 N/A N/A 0.160±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006935 IEA chemotaxis
GO:0006955 IEA immune response
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0009897 IDA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016494 IEA C-X-C chemokine receptor activity
GO:0032467 IEA positive regulation of cytokinesis
GO:0042113 IEA B cell activation
GO:0048535 IMP lymph node development
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010514 CXCR5 chemokine (C-X-C motif) receptor 5 protein_coding Danio_rerio
ENSG00000160683 CXCR5 chemokine (C-X-C motif) receptor 5 protein_coding Homo_sapiens

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