C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ripply2 homolog (zebrafish)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047897 Ripply2 10090 + 9:87015537-87019917 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058846 Ripply2-001 87015537-87019917 protein_coding
  ENSMUST00000188187 Ripply2-002 87015636-87019916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartENSMUST00000058846ENSMUST00000188187
Transcript ID Adrenal Brain Heart
ENSMUST00000058846 0.503±0.21 0.527±0.18 N/A
ENSMUST00000188187 0.524±0.21 1.451±0.65 0.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000677 CIL_000677_0002 CGP 9:86765923-87019917
CIL_000819 CIL_000819_0002 VISTA 9:86855250-87464091
CIL_000676 CIL_000676_0002 CGP 9:87015537-87077774

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IMP ossification
GO:0001756 IDA somitogenesis
GO:0005634 ISS nucleus
GO:0007219 IGI Notch signaling pathway
GO:0007368 IMP determination of left/right symmetry
GO:0009798 IMP axis specification
GO:0010468 IGI regulation of gene expression
GO:0032525 IDA somite rostral/caudal axis specification
GO:0036342 IMP post-anal tail morphogenesis
GO:0060349 IGI bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070535 ripply2 ripply2 protein_coding Danio_rerio
ENSG00000203877 RIPPLY2 ripply transcriptional repressor 2 protein_coding Homo_sapiens

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