C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleophosmin/nucleoplasmin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047911 Npm2 10090 - 14:70647302-70653084 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062629 Npm2-201 70647302-70653084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000062629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000062629 0.206±0.10 0.141±0.04 0.303±0.00 0.494±0.13 0.183±0.05 0.094±0.00 0.061±0.02 0.212±0.06 0.132±0.05 0.099±0.03 0.239±0.07 18.598±6.32 0.318±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000789 ISS cytoplasmic chromatin
GO:0000790 ISS nuclear chromatin
GO:0003676 IEA nucleic acid binding
GO:0003682 IDA chromatin binding
GO:0005634 ISS nucleus
GO:0006338 ISS chromatin remodeling
GO:0007096 ISS regulation of exit from mitosis
GO:0007338 ISS single fertilization
GO:0009790 ISS embryo development
GO:0009994 ISS oocyte differentiation
GO:0019899 IEA enzyme binding
GO:0043085 IEA positive regulation of catalytic activity
GO:0045740 IEA positive regulation of DNA replication
GO:0045836 ISS positive regulation of meiosis
GO:0051054 IEA positive regulation of DNA metabolic process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053963 npm2b nucleophosmin/nucleoplasmin, 2b protein_coding Danio_rerio
ENSG00000158806 NPM2 nucleophosmin/nucleoplasmin 2 protein_coding Homo_sapiens

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