C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: starch binding domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047963 Stbd1 10090 + 5:92603051-92606579 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050952 Stbd1-201 92603051-92606579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050952 3.593±1.44 2.738±0.23 6.668±0.08 1.236±0.30 2.631±1.42 1.748±0.30 2.519±0.31 2.981±0.25 11.297±9.88 7.617±2.52 14.033±2.74 11.601±3.45 2.483±0.99 0.925±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0002 VISTA 5:92327753-92928377
CIL_00071I CIL_00071I_0002 CGP 5:92555069-92606579
CIL_00071P CIL_00071P_0002 CGP 5:92603051-92675271

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:2001070 IEA starch binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086641 stbd1 starch binding domain 1 protein_coding Danio_rerio
ENSG00000118804 FAM47E-STBD1 FAM47E-STBD1 readthrough protein_coding Homo_sapiens

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