C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cation channel, sperm associated 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048003 Catsper4 10090 - 4:134211970-134227383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055892 Catsper4-001 134211970-134227383 protein_coding
  ENSMUST00000105878 Catsper4-002 134225436-134227372 protein_coding
  ENSMUST00000130984 Catsper4-003 134226498-134227350 processed_transcript
  ENSMUST00000169381 Catsper4-201 134211970-134227383 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055892ENSMUST00000105878ENSMUST00000130984ENSMUST00000169381
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055892 0.053±0.00 0.144±0.00 N/A 0.094±0.01 0.342±0.10 0.034±0.00 0.264±0.11 N/A 0.085±0.00 0.464±0.07 0.081±0.00 0.168±0.10 55.135±23.31
ENSMUST00000105878 0.154±0.00 N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A 0.194±0.00 N/A N/A
ENSMUST00000130984 0.708±0.00 N/A N/A 0.283±0.18 1.281±0.54 N/A N/A N/A N/A N/A 0.322±0.00 0.502±0.00 N/A
ENSMUST00000169381 N/A N/A 0.022±0.02 0.065±0.01 0.373±0.00 0.020±0.00 0.143±0.00 0.019±0.01 0.203±0.03 N/A 0.139±0.09 0.353±0.26 36.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0005227 IEA calcium activated cation channel activity
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0006814 IMP sodium ion transport
GO:0007275 IEA multicellular organismal development
GO:0030317 IMP sperm motility
GO:0034765 IEA regulation of ion transmembrane transport
GO:0036128 IDA CatSper complex
GO:0048240 IMP sperm capacitation
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential
GO:0097228 IDA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000188782 CATSPER4 cation channel, sperm associated 4 protein_coding Homo_sapiens

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