C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small integral membrane protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048442 Smim5 10090 + 11:115899966-115906269 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000131566 Smim5-003 115900202-115905713 protein_coding
  ENSMUST00000142089 Smim5-002 115900178-115905896 protein_coding
  ENSMUST00000152171 Smim5-001 115899966-115906269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131566ENSMUST00000142089ENSMUST00000152171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131566 N/A 0.560±0.13 1.457±0.48 0.314±0.16 0.795±0.32 1.160±0.34 N/A N/A 1.777±1.88 N/A 0.215±0.08 1.377±0.22 0.442±0.21 0.468±0.35
ENSMUST00000142089 0.576±0.21 0.330±0.16 N/A 0.164±0.04 0.556±0.00 3.183±1.62 4.234±0.39 5.425±0.91 3.775±2.42 2.114±0.41 0.412±0.14 3.225±0.88 0.196±0.03 0.045±0.00
ENSMUST00000152171 1.848±1.11 0.547±0.13 3.509±0.67 0.222±0.00 1.263±0.41 2.828±0.62 7.197±0.85 8.452±0.86 7.846±8.89 4.015±0.42 0.371±0.14 3.866±0.88 0.666±0.41 0.560±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007IO CIL_0007IO_0002 CGP 11:115892595-115933477

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204323 SMIM5 small integral membrane protein 5 protein_coding Homo_sapiens

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