C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoic acid receptor responder (tazarotene induced) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049404 Rarres1 10090 - 3:67478886-67515523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054825 Rarres1-001 67478972-67515523 protein_coding
  ENSMUST00000178314 Rarres1-201 67478886-67515523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054825ENSMUST00000178314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054825 1.173±0.47 N/A 0.351±0.12 0.209±0.16 1.796±0.52 1.370±0.14 0.359±0.05 0.855±0.49 6.358±6.05 0.759±0.43 0.326±0.14 0.260±0.17 0.851±0.45 2.123±0.70
ENSMUST00000178314 N/A 2.279±1.05 N/A 0.299±0.00 1.816±0.61 1.093±0.17 N/A 0.700±0.35 4.114±5.22 0.653±0.64 0.189±0.12 0.256±0.11 0.980±0.57 0.825±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BM CIL_0008BM_0002 VISTA 3:66890932-67492590
CIL_0008KO CIL_0008KO_0002 VISTA 3:66912683-67513884
CIL_000808 CIL_000808_0002 VISTA 3:67009670-67610443
CIL_000815 CIL_000815_0002 VISTA 3:67040647-67641402
CIL_000937 CIL_000937_0002 VISTA 3:67250193-67852228
CIL_0001ZA CIL_0001ZA_0002 CGP 3:67457998-67515523
CIL_0004JT CIL_0004JT_0003 CGP 3:67478886-67604231

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043102 lxn latexin protein_coding Danio_rerio
ENSG00000118849 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 protein_coding Homo_sapiens

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