C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 17 (anion/sugar transporter), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049624 Slc17a5 10090 - 9:78536488-78588041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052441 Slc17a5-001 78536488-78588041 protein_coding
  ENSMUST00000117645 Slc17a5-002 78536506-78588015 protein_coding
  ENSMUST00000119213 Slc17a5-003 78569841-78588027 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052441ENSMUST00000117645ENSMUST00000119213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052441 6.578±1.26 7.009±1.38 5.385±0.51 3.163±0.92 4.967±0.90 14.461±1.39 2.206±0.45 24.947±2.97 5.756±3.56 9.316±0.43 1.109±0.25 6.334±2.19 4.328±2.08 0.810±0.19
ENSMUST00000117645 N/A N/A N/A N/A N/A N/A N/A N/A 2.329±0.00 N/A N/A 1.692±0.92 0.869±0.00 N/A
ENSMUST00000119213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.729±0.01 2.467±0.00 2.532±0.00 0.675±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PR CIL_0006PR_0002 CGP 9:78478449-78588041
CIL_0006PQ CIL_0006PQ_0002 CGP 9:78536488-78716253

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005765 IEA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0006865 IEA amino acid transport
GO:0015136 IEA sialic acid transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015739 IEA sialic acid transport
GO:0016021 IEA integral component of membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055190 slc17a5 solute carrier family 17 (anion/sugar transporter), member 5 protein_coding Danio_rerio
ENSG00000119899 SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 protein_coding Homo_sapiens

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