C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049744 Arhgap15 10090 + 2:43748824-44395953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055776 Arhgap15-001 43748870-44387623 protein_coding
  ENSMUST00000112822 Arhgap15-003 43748834-44387619 nonsense_mediated_decay
  ENSMUST00000112824 Arhgap15-002 43748824-44395953 protein_coding
  ENSMUST00000128630 Arhgap15-005 44065041-44142456 processed_transcript
  ENSMUST00000140528 Arhgap15-004 43748869-43894708 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055776ENSMUST00000112822ENSMUST00000112824ENSMUST00000128630ENSMUST00000140528
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055776 0.442±0.19 0.220±0.13 0.926±0.24 0.230±0.12 1.974±0.88 0.332±0.13 0.344±0.19 0.649±0.25 1.247±1.21 1.395±0.56 0.431±0.12 0.584±0.42 0.138±0.13 0.407±0.16
ENSMUST00000112822 1.141±0.00 N/A 0.380±0.00 N/A 1.079±0.97 N/A N/A 0.459±0.18 0.880±0.33 0.343±0.00 N/A 0.328±0.00 0.088±0.00 N/A
ENSMUST00000112824 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.65 0.070±0.00 0.995±0.00
ENSMUST00000140528 N/A 0.070±0.00 N/A N/A 0.374±0.10 N/A 0.009±0.00 N/A 0.028±0.00 N/A N/A N/A N/A 0.053±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RY CIL_0008RY_0002 VISTA 2:43481987-44083031
CIL_0006M7 CIL_0006M7_0002 CGP 2:43555329-44395953
CIL_0008IO CIL_0008IO_0002 VISTA 2:43677738-44279507
CIL_0008RZ CIL_0008RZ_0002 VISTA 2:43686279-44287229
CIL_0008RC CIL_0008RC_0002 VISTA 2:43689287-44291110
CIL_0006M8 CIL_0006M8_0002 CGP 2:43748824-44927657

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0007165 IEA signal transduction
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane
GO:0030675 IEA Rac GTPase activator activity
GO:0032855 IEA positive regulation of Rac GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062349 arhgap15 Rho GTPase activating protein 15 protein_coding Danio_rerio
ENSG00000075884 ARHGAP15 Rho GTPase activating protein 15 protein_coding Homo_sapiens

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