C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 171, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050530 Fam171a1 10090 + 2:3114224-3227806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062934 Fam171a1-004 3118685-3227806 protein_coding
  ENSMUST00000072955 Fam171a1-003 3114224-3227250 protein_coding
  ENSMUST00000091505 Fam171a1-002 3118413-3227252 protein_coding
  ENSMUST00000115099 Fam171a1-001 3118382-3227806 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062934ENSMUST00000072955ENSMUST00000091505ENSMUST00000115099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062934 N/A N/A N/A 5.686±0.00 N/A N/A N/A N/A N/A N/A N/A 6.645±0.00 3.509±0.00 N/A
ENSMUST00000072955 N/A N/A N/A N/A N/A N/A N/A 2.228±0.00 0.351±0.10 N/A 0.211±0.00 2.498±0.00 3.726±1.02 0.484±0.15
ENSMUST00000091505 2.309±0.29 1.692±0.25 N/A 7.053±2.75 1.495±0.00 1.490±0.00 1.041±0.00 N/A 0.330±0.00 3.439±0.00 N/A 5.067±0.49 7.626±3.55 0.171±0.00
ENSMUST00000115099 13.609±3.51 10.830±1.40 8.512±0.25 17.077±3.06 7.002±0.57 8.770±0.65 4.230±0.64 10.719±1.00 1.109±0.27 21.604±2.35 1.092±0.17 21.964±5.14 11.651±2.00 1.028±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z0 CIL_0005Z0_0002 CGP 2:3114224-3328877

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079788 fam171a1 family with sequence similarity 171, member A1 protein_coding Danio_rerio
ENSG00000148468 FAM171A1 family with sequence similarity 171, member A1 protein_coding Homo_sapiens

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