C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: isthmin 2 homolog (zebrafish)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050671 Ism2 10090 - 12:87278638-87299705 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051601 Ism2-201 87279682-87287137 protein_coding
  ENSMUST00000125733 Ism2-001 87278638-87299705 protein_coding
  ENSMUST00000145714 Ism2-002 87282420-87287073 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051601ENSMUST00000125733ENSMUST00000145714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051601 1.535±0.11 0.056±0.00 0.063±0.00 0.159±0.04 0.273±0.13 0.095±0.06 N/A 0.017±0.01 0.082±0.03 0.147±0.00 0.024±0.00 0.454±0.24 0.133±0.03 0.062±0.02
ENSMUST00000125733 0.467±0.35 0.063±0.02 0.096±0.03 0.174±0.06 0.249±0.09 0.074±0.03 0.047±0.02 0.017±0.00 0.082±0.05 0.152±0.01 0.024±0.00 0.339±0.16 0.841±0.52 0.077±0.04
ENSMUST00000145714 0.133±0.00 0.071±0.03 N/A N/A N/A 0.106±0.02 N/A N/A 0.122±0.00 0.211±0.00 N/A 0.305±0.00 1.569±0.28 0.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TX CIL_0004TX_0002 CGP 12:87266746-87299705
CIL_00064L CIL_00064L_0003 CGP 12:87278638-87388355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053859 ism2b isthmin 2b protein_coding Danio_rerio
ENSDARG00000089691 ISM2 (2 of 2) isthmin 2 protein_coding Danio_rerio
ENSG00000100593 ISM2 isthmin 2 protein_coding Homo_sapiens

Loading