C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2ba
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050799 Hist1h2ba 10090 - 13:23933773-23934156 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052776 Hist1h2ba-001 23933773-23934156 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungPlacentaTestisENSMUST00000052776
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Placenta Testis
ENSMUST00000052776 9.541±0.00 0.662±0.59 0.585±0.00 0.147±0.00 0.276±0.08 1.383±1.57 1.668±0.00 0.021±0.00 108.897±18.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LK CIL_0000LK_0005 CGP 13:23933773-23934851

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IDA nucleosome
GO:0005654 TAS nucleoplasm
GO:0006334 IMP nucleosome assembly
GO:0006337 IMP nucleosome disassembly
GO:0006954 IMP inflammatory response
GO:0019897 IDA extrinsic component of plasma membrane
GO:0031639 IMP plasminogen activation
GO:0035093 IMP spermatogenesis, exchange of chromosomal proteins
GO:0046982 IEA protein heterodimerization activity
GO:0051099 IMP positive regulation of binding
GO:0071674 IMP mononuclear cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039547 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000070254 si:dkey-261m9.19 si:dkey-261m9.19 protein_coding Danio_rerio
ENSDARG00000070297 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000074491 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000075216 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000075482 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000079909 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000086751 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000087694 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000088259 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000089039 protein_coding Danio_rerio
ENSDARG00000089397 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000089405 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000089719 si:dkey-108k21.11 si:dkey-108k21.11 protein_coding Danio_rerio
ENSDARG00000091066 zgc:112234 zgc:112234 protein_coding Danio_rerio
ENSDARG00000091265 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000091728 zgc:173587 zgc:173587 protein_coding Danio_rerio
ENSDARG00000095115 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSG00000146047 HIST1H2BA histone cluster 1, H2ba protein_coding Homo_sapiens

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