C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 940
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050855 Zfp940 10090 - 7:29833620-29853669 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000085792 Zfp940-001 29843936-29853648 protein_coding
  ENSMUST00000108223 Zfp940-003 29833620-29853669 protein_coding
  ENSMUST00000128205 Zfp940-004 29850951-29853442 processed_transcript
  ENSMUST00000145098 Zfp940-002 29843250-29853641 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085792ENSMUST00000108223ENSMUST00000145098
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085792 0.292±0.14 0.290±0.17 0.384±0.02 3.948±2.28 0.204±0.11 0.140±0.06 0.106±0.04 0.221±0.02 0.216±0.10 0.256±0.11 0.331±0.11 0.518±0.44 0.564±0.42 1.173±1.74
ENSMUST00000108223 0.123±0.04 0.148±0.05 N/A N/A 0.123±0.04 0.183±0.10 0.107±0.01 0.123±0.07 0.123±0.04 0.113±0.04 0.109±0.03 0.249±0.13 0.209±0.09 0.207±0.11
ENSMUST00000145098 0.125±0.00 0.077±0.00 0.123±0.02 0.479±0.00 0.143±0.04 0.088±0.01 0.043±0.00 0.168±0.11 0.075±0.04 0.145±0.08 0.144±0.07 0.188±0.09 0.120±0.03 0.049±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076108 zgc:194336 zgc:194336 protein_coding Danio_rerio
ENSDARG00000088352 si:ch211-271g18.3 si:ch211-271g18.3 protein_coding Danio_rerio
ENSDARG00000089537 CABZ01079304.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090942 CABZ01054394.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093134 CR388165.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096851 si:dkey-111k8.6 si:dkey-111k8.6 protein_coding Danio_rerio
ENSG00000197863 ZNF790 zinc finger protein 790 protein_coding Homo_sapiens

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