C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pseudouridylate synthase-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051557 Pusl1 10090 - 4:155887879-155891781 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097737 Pusl1-001 155888862-155891781 protein_coding
  ENSMUST00000123504 Pusl1-007 155887879-155889513 processed_transcript
  ENSMUST00000129637 Pusl1-006 155890380-155891209 retained_intron
  ENSMUST00000130146 Pusl1-004 155891052-155891728 retained_intron
  ENSMUST00000142566 Pusl1-002 155890839-155891769 processed_transcript
  ENSMUST00000142724 Pusl1-005 155890494-155891726 retained_intron
  ENSMUST00000150446 Pusl1-003 155890778-155891755 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097737ENSMUST00000130146ENSMUST00000142724ENSMUST00000150446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097737 19.265±2.82 13.954±2.70 14.748±4.38 18.080±6.16 13.793±2.58 10.938±1.19 4.953±1.52 7.867±1.57 9.385±2.66 12.175±0.99 5.419±0.59 16.619±2.65 11.629±3.32 4.920±0.48
ENSMUST00000130146 N/A N/A N/A N/A 19.667±0.00 13.729±0.00 N/A N/A N/A 19.710±0.96 N/A 37.859±6.26 N/A N/A
ENSMUST00000142724 N/A 13.645±3.44 N/A N/A 14.661±2.86 7.648±1.10 N/A N/A N/A 8.632±1.56 N/A 12.194±1.05 N/A N/A
ENSMUST00000150446 N/A 9.596±0.89 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0008033 IEA tRNA processing
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074565 PUSL1 pseudouridylate synthase-like 1 protein_coding Danio_rerio
ENSG00000169972 PUSL1 pseudouridylate synthase-like 1 protein_coding Homo_sapiens

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