C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: triggering receptor expressed on myeloid cells-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051682 Treml4 10090 + 17:48264295-48275360 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059873 Treml4-001 48264295-48275360 protein_coding
  ENSMUST00000125426 Treml4-004 48264341-48274666 protein_coding
  ENSMUST00000136272 Treml4-003 48264337-48274493 protein_coding
  ENSMUST00000153131 Treml4-006 48272439-48274512 retained_intron
  ENSMUST00000153420 Treml4-005 48264373-48274500 protein_coding
  ENSMUST00000154335 Treml4-002 48264337-48274493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059873ENSMUST00000125426ENSMUST00000136272ENSMUST00000153131ENSMUST00000153420ENSMUST00000154335
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059873 0.179±0.04 0.398±0.18 0.208±0.00 0.013±0.01 0.696±0.34 0.360±0.25 0.293±0.16 0.205±0.05 2.159±0.96 2.885±0.26 0.053±0.02 0.224±0.13 0.074±0.04 N/A
ENSMUST00000125426 0.459±0.00 N/A 0.107±0.00 0.039±0.01 0.409±0.24 N/A 0.252±0.00 0.337±0.04 0.755±0.30 1.299±0.29 0.059±0.00 0.193±0.15 N/A 0.094±0.00
ENSMUST00000136272 0.244±0.00 N/A N/A N/A 0.634±0.00 N/A N/A 0.155±0.00 N/A N/A N/A 0.134±0.01 0.176±0.08 N/A
ENSMUST00000153131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00 N/A 0.080±0.00
ENSMUST00000153420 0.169±0.00 0.525±0.24 N/A N/A N/A N/A 0.110±0.03 N/A N/A N/A N/A 0.280±0.00 0.105±0.00 0.045±0.00
ENSMUST00000154335 N/A 0.172±0.00 N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A 0.222±0.17 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XI CIL_0008XI_0002 VISTA 17:47688296-48291797
CIL_0008IB CIL_0008IB_0002 VISTA 17:47708185-48309224
CIL_0007QG CIL_0007QG_0002 VISTA 17:47710565-48311720
CIL_0008F3 CIL_0008F3_0002 VISTA 17:47757242-48358147

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000188056 TREML4 triggering receptor expressed on myeloid cells-like 4 protein_coding Homo_sapiens

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