C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 198
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051703 Tmem198 10090 + 1:75479532-75485705 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050899 Tmem198-002 75479580-75485705 protein_coding
  ENSMUST00000113575 Tmem198-001 75479532-75485693 protein_coding
  ENSMUST00000148980 Tmem198-003 75479576-75482612 protein_coding
  ENSMUST00000187411 Tmem198-005 75479704-75482675 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050899ENSMUST00000113575ENSMUST00000148980ENSMUST00000187411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050899 0.331±0.23 N/A N/A 2.044±0.00 0.221±0.03 0.186±0.00 0.084±0.04 0.176±0.12 0.036±0.02 0.288±0.08 0.084±0.00 1.080±0.30 0.782±0.47 0.532±0.12
ENSMUST00000113575 0.981±0.16 4.969±0.78 0.889±0.15 27.999±5.85 1.229±0.49 1.690±0.33 0.166±0.07 0.441±0.14 0.094±0.08 2.388±0.52 0.099±0.04 4.642±1.43 1.709±1.39 3.309±1.10
ENSMUST00000148980 N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.02 N/A N/A N/A N/A N/A
ENSMUST00000187411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_00082R CIL_00082R_0002 VISTA 1:75469003-76073592

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane
GO:0016023 IEA cytoplasmic membrane-bounded vesicle
GO:0016055 IEA Wnt signaling pathway
GO:0090263 IEA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034685 tmem198b transmembrane protein 198b protein_coding Danio_rerio
ENSDARG00000042115 tmem198a transmembrane protein 198a protein_coding Danio_rerio
ENSG00000188760 TMEM198 transmembrane protein 198 protein_coding Homo_sapiens

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