C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 133
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051956 Rnf133 10090 - 6:23648869-23650305 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063548 Rnf133-001 23648869-23650305 protein_coding
  ENSMUST00000115354 Rnf133-002 23648874-23650206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungPlacentaTestisENSMUST00000063548ENSMUST00000115354
Transcript ID Bladder Brain Breast Colon Kidney Lung Placenta Testis
ENSMUST00000063548 0.006±0.00 0.006±0.00 N/A 0.086±0.00 0.062±0.03 0.061±0.00 0.008±0.00 28.282±8.87
ENSMUST00000115354 0.001±0.00 0.019±0.00 0.073±0.00 N/A N/A 0.085±0.00 N/A 61.667±9.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QO CIL_0003QO_0002 CGP 6:23245047-23839421
CIL_0001E7 CIL_0001E7_0002 CGP 6:23262773-23839421
CIL_0001E8 CIL_0001E8_0002 CGP 6:23648869-23655136

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005789 IDA endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016867 rnf128a ring finger protein 128a protein_coding Danio_rerio
ENSDARG00000029890 si:dkeyp-86f7.4 si:dkeyp-86f7.4 protein_coding Danio_rerio
ENSG00000188050 RNF133 ring finger protein 133 protein_coding Homo_sapiens

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