C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: talin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052698 Tln2 10090 - 9:67217087-67559703 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039662 Tln2-201 67221138-67539392 protein_coding
  ENSMUST00000040025 Tln2-202 67217087-67559703 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039662ENSMUST00000040025
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039662 6.917±2.41 3.602±0.18 1.021±0.28 1.613±0.44 4.660±0.79 2.626±0.60 3.090±0.84 6.987±0.78 0.345±0.16 2.358±0.30 3.708±0.98 4.522±1.85 1.996±1.25 4.055±0.58
ENSMUST00000040025 4.353±0.65 1.711±0.11 N/A N/A 1.641±0.85 1.301±0.73 2.405±0.68 N/A 0.154±0.01 1.709±0.99 3.992±1.89 2.329±0.91 0.326±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098V CIL_00098V_0002 VISTA 9:66700483-67304558
CIL_00094O CIL_00094O_0002 VISTA 9:66740666-67343521
CIL_0005H2 CIL_0005H2_0002 CGP 9:67022590-67559703

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0005158 IEA insulin receptor binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0005916 IDA fascia adherens
GO:0005925 IEA focal adhesion
GO:0007016 IEA cytoskeletal anchoring at plasma membrane
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017901 tln2a talin 2a protein_coding Danio_rerio
ENSDARG00000044271 TLN2 (2 of 2) talin 2 protein_coding Danio_rerio
ENSG00000171914 TLN2 talin 2 protein_coding Homo_sapiens

Loading