C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: charged multivesicular body protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053119 Chmp3 10090 + 6:71543797-71582609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059462 Chmp3-001 71543797-71581579 protein_coding
  ENSMUST00000065364 Chmp3-002 71543917-71582609 protein_coding
  ENSMUST00000127774 Chmp3-004 71543852-71560952 processed_transcript
  ENSMUST00000128382 Chmp3-006 71577589-71579819 processed_transcript
  ENSMUST00000132917 Chmp3-005 71543929-71560971 processed_transcript
  ENSMUST00000142169 Chmp3-003 71544353-71574127 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059462ENSMUST00000065364ENSMUST00000132917ENSMUST00000142169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059462 22.264±6.53 11.324±6.90 42.915±2.08 20.182±4.24 22.297±8.63 18.834±4.17 14.371±2.42 19.335±9.42 15.179±4.52 18.132±4.62 12.201±1.22 20.972±7.19 20.125±5.89 6.727±2.07
ENSMUST00000065364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.953±0.39 31.585±7.02 33.576±6.97 11.005±12.86
ENSMUST00000132917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 74.130±0.00 78.196±0.00
ENSMUST00000142169 N/A N/A N/A 238.324±0.00 N/A N/A N/A N/A N/A N/A N/A 260.635±0.00 192.517±48.07 224.168±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005546 IEA phosphatidylinositol-4,5-bisphosphate binding
GO:0005769 IEA early endosome
GO:0005770 IEA late endosome
GO:0007049 IEA cell cycle
GO:0008333 IEA endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030496 IEA midbody
GO:0032467 IEA positive regulation of cytokinesis
GO:0051036 IEA regulation of endosome size
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038064 chmp3 charged multivesicular body protein 3 protein_coding Danio_rerio
ENSG00000115561 CHMP3 charged multivesicular body protein 3 protein_coding Homo_sapiens
ENSG00000249884 RNF103-CHMP3 RNF103-CHMP3 readthrough protein_coding Homo_sapiens

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