C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053199 Arhgap20 10090 + 9:51765337-51853856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065496 Arhgap20-002 51765352-51853856 protein_coding
  ENSMUST00000124907 Arhgap20-005 51765337-51790249 retained_intron
  ENSMUST00000126567 Arhgap20-006 51816013-51829397 processed_transcript
  ENSMUST00000130405 Arhgap20-001 51765660-51850651 protein_coding
  ENSMUST00000146509 Arhgap20-004 51765345-51825685 retained_intron
  ENSMUST00000149754 Arhgap20-003 51831772-51848649 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065496ENSMUST00000124907ENSMUST00000126567ENSMUST00000130405ENSMUST00000146509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065496 0.921±0.06 0.139±0.07 0.745±0.14 2.671±0.73 0.521±0.23 0.937±0.51 1.249±0.19 0.045±0.03 0.011±0.01 0.856±0.31 4.254±1.25 0.506±0.15 0.127±0.14 2.154±0.68
ENSMUST00000124907 N/A N/A N/A N/A N/A 0.242±0.01 N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000126567 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A 0.521±0.37 N/A
ENSMUST00000130405 N/A 0.077±0.00 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A 0.464±0.05 N/A N/A
ENSMUST00000146509 N/A 0.383±0.13 N/A N/A 0.698±0.10 1.174±0.41 N/A N/A N/A N/A N/A 1.500±0.68 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089326 arhgap20 Rho GTPase activating protein 20 protein_coding Danio_rerio
ENSG00000137727 ARHGAP20 Rho GTPase activating protein 20 protein_coding Homo_sapiens

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