C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA methyltransferase 1 like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053286 Trmt1l 10090 + 1:151428542-151458161 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065625 Trmt1l-001 151428542-151458161 protein_coding
  ENSMUST00000185230 Trmt1l-004 151428667-151436707 retained_intron
  ENSMUST00000186244 Trmt1l-005 151428648-151430636 retained_intron
  ENSMUST00000188179 Trmt1l-002 151428542-151443708 retained_intron
  ENSMUST00000188679 Trmt1l-003 151428637-151436707 retained_intron
  ENSMUST00000188843 Trmt1l-006 151428642-151450941 retained_intron
  ENSMUST00000189655 Trmt1l-007 151428706-151458161 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065625ENSMUST00000185230ENSMUST00000188179ENSMUST00000188843ENSMUST00000189655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065625 7.822±1.27 4.744±0.52 13.840±3.06 13.477±0.55 6.023±0.78 6.252±1.37 5.423±1.39 8.022±0.48 7.271±2.69 6.600±1.65 5.153±0.43 8.202±1.09 11.125±0.41 6.751±1.86
ENSMUST00000185230 N/A 8.480±3.73 N/A N/A 10.272±0.36 4.865±0.00 N/A N/A N/A N/A N/A 5.883±0.48 N/A N/A
ENSMUST00000188179 N/A 4.755±1.51 N/A N/A N/A 3.995±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188843 N/A 4.630±0.87 N/A N/A N/A 3.297±0.29 N/A N/A N/A N/A N/A 6.801±2.16 N/A N/A
ENSMUST00000189655 N/A N/A N/A 4.652±0.00 8.619±0.00 N/A N/A N/A 2.214±0.12 N/A N/A 10.673±1.34 9.151±0.56 4.423±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0004809 IEA tRNA (guanine-N2-)-methyltransferase activity
GO:0008344 IMP adult locomotory behavior
GO:0030488 IEA tRNA methylation
GO:0030534 IMP adult behavior
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042057 trmt1l tRNA methyltransferase 1 homolog (S. cerevisiae)-like protein_coding Danio_rerio
ENSG00000121486 TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like protein_coding Homo_sapiens

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