C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, AN1-type domain 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053581 Zfand2a 10090 - 5:139471211-139484549 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079996 Zfand2a-001 139471211-139484549 protein_coding
  ENSMUST00000110851 Zfand2a-002 139471216-139484517 protein_coding
  ENSMUST00000132454 Zfand2a-005 139474920-139478943 processed_transcript
  ENSMUST00000143889 Zfand2a-004 139479077-139484428 processed_transcript
  ENSMUST00000150992 Zfand2a-003 139478482-139484464 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079996ENSMUST00000110851
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079996 3.883±0.90 2.325±0.59 3.161±0.02 2.265±0.21 1.138±0.20 1.163±0.00 1.018±0.11 1.575±0.41 0.984±0.34 2.495±0.53 0.982±0.40 2.239±0.96 4.854±0.52 1.091±0.12
ENSMUST00000110851 5.928±1.25 5.233±1.08 5.556±0.09 6.910±1.34 3.226±0.73 4.407±1.44 3.618±0.34 3.735±0.38 1.854±0.64 5.721±0.74 2.033±0.49 3.715±1.54 10.590±7.01 2.626±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_0000ZS CIL_0000ZS_0002 CGP 5:139423151-139484549
CIL_0002HD CIL_0002HD_0003 CGP 5:139471211-139548179

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IDA proteasome complex
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0032436 IMP positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0071243 IMP cellular response to arsenic-containing substance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003283 zfand2a zinc finger, AN1-type domain 2A protein_coding Danio_rerio
ENSG00000178381 ZFAND2A zinc finger, AN1-type domain 2A protein_coding Homo_sapiens

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