C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 6330403A02 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053963 6330403A02Rik 10090 - 1:180432387-180483504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000136521 6330403A02Rik-001 180432387-180483467 protein_coding
  ENSMUST00000179826 6330403A02Rik-201 180438329-180483504 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000136521ENSMUST00000179826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000136521 0.588±0.30 0.033±0.01 10.756±3.79 10.191±11.99 0.201±0.06 5.250±3.38 0.144±0.00 0.039±0.03 0.478±0.08 0.160±0.07 0.630±0.15 0.069±0.05 0.100±0.07
ENSMUST00000179826 2.387±0.00 0.520±0.39 N/A 2.748±0.00 1.046±0.11 21.940±6.67 0.885±0.00 0.063±0.02 2.381±0.56 N/A 5.023±1.02 N/A 0.361±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000985 CIL_000985_0002 VISTA 1:179908053-180512549
CIL_0008CY CIL_0008CY_0002 VISTA 1:179968494-180569356

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041915 C20H1orf95 chromosome 1 open reading frame 95 protein_coding Danio_rerio
ENSG00000203685 C1orf95 chromosome 1 open reading frame 95 protein_coding Homo_sapiens

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