C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: granzyme M (lymphocyte met-ase 1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054206 Gzmm 10090 + 10:79689020-79695261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020549 Gzmm-001 79689020-79695261 protein_coding
  ENSMUST00000151213 Gzmm-002 79693758-79695260 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020549ENSMUST00000151213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020549 0.359±0.12 0.288±0.11 0.600±0.08 0.477±0.21 0.555±0.20 0.238±0.06 1.548±0.24 0.332±0.14 0.145±0.08 0.611±0.30 3.600±0.52 0.300±0.12 1.108±0.84 0.267±0.01
ENSMUST00000151213 0.188±0.00 0.179±0.12 N/A N/A N/A 0.267±0.12 1.677±0.25 N/A N/A N/A N/A 0.293±0.13 3.479±2.69 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0001FW CIL_0001FW_0002 CGP 10:79682195-79695261
CIL_00008J CIL_00008J_0002 CGP 10:79689020-79711969

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0006508 IEA proteolysis
GO:0016020 IEA membrane
GO:0019835 IDA cytolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197540 GZMM granzyme M (lymphocyte met-ase 1) protein_coding Homo_sapiens

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