C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A630033H20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054293 A630033H20Rik 10090 + X:107148927-107173661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067249 A630033H20Rik-001 107149615-107173657 protein_coding
  ENSMUST00000125676 A630033H20Rik-003 107149454-107171427 protein_coding
  ENSMUST00000137107 A630033H20Rik-004 107149598-107171147 protein_coding
  ENSMUST00000147521 A630033H20Rik-002 107148927-107171401 protein_coding
  ENSMUST00000167673 A630033H20Rik-201 107148927-107173661 protein_coding
  ENSMUST00000180182 A630033H20Rik-202 107149454-107173661 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067249ENSMUST00000125676ENSMUST00000137107ENSMUST00000147521ENSMUST00000167673ENSMUST00000180182
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067249 0.404±0.08 0.367±0.15 0.127±0.05 0.143±0.03 1.533±0.12 0.187±0.06 0.348±0.00 0.287±0.15 0.228±0.12 0.716±0.29 0.027±0.03 0.455±0.22 0.182±0.08 0.034±0.00
ENSMUST00000125676 1.026±0.57 1.816±0.00 N/A N/A 4.240±1.30 N/A 0.280±0.03 0.589±0.27 N/A 0.953±0.17 N/A 0.497±0.29 N/A 0.025±0.00
ENSMUST00000137107 N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A 0.632±0.00 N/A 0.241±0.00
ENSMUST00000147521 N/A 1.781±0.52 N/A N/A 2.740±0.88 0.389±0.17 0.436±0.00 1.013±0.00 0.310±0.20 1.451±0.41 N/A 1.215±0.68 N/A N/A
ENSMUST00000167673 0.443±0.00 N/A 0.049±0.01 0.040±0.00 1.461±0.00 N/A N/A N/A 0.249±0.10 0.503±0.01 0.031±0.00 0.133±0.08 0.035±0.00 N/A
ENSMUST00000180182 N/A N/A 0.066±0.00 0.024±0.00 1.716±0.00 N/A 0.327±0.00 0.166±0.00 0.120±0.02 N/A 0.073±0.09 0.132±0.00 0.137±0.06 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YM CIL_0000YM_0003 CGP X:107148927-107296769

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004930 IEA G-protein coupled receptor activity
GO:0005575 ND cellular_component
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062811 p2ry10 purinergic receptor P2Y, G-protein coupled, 10 protein_coding Danio_rerio

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