C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysocardiolipin acyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054469 Lclat1 10090 + 17:73107985-73243368 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067545 Lclat1-001 73107994-73243368 protein_coding
  ENSMUST00000130574 Lclat1-002 73107985-73161991 protein_coding
  ENSMUST00000131335 Lclat1-004 73162989-73239908 processed_transcript
  ENSMUST00000134149 Lclat1-005 73204150-73240371 processed_transcript
  ENSMUST00000149064 Lclat1-003 73107988-73196778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067545ENSMUST00000130574ENSMUST00000149064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067545 1.536±0.91 3.022±0.64 0.981±0.22 0.508±0.00 1.711±0.53 4.586±0.65 4.027±1.04 3.553±2.09 2.779±2.60 5.307±1.87 1.122±0.51 3.492±1.33 4.212±1.61 1.617±0.81
ENSMUST00000130574 13.433±3.38 10.535±1.23 N/A N/A 8.842±1.02 29.798±10.84 33.926±0.00 32.987±5.64 19.342±9.05 26.061±4.34 N/A 11.351±3.41 N/A 11.927±1.31
ENSMUST00000149064 N/A 5.307±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.229±1.38 N/A 1.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099K CIL_00099K_0002 VISTA 17:72722163-73324151
CIL_0000VG CIL_0000VG_0002 CGP 17:72918305-73243368
CIL_0000VF CIL_0000VF_0002 CGP 17:73107985-73399296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003841 IEA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005783 IDA endoplasmic reticulum
GO:0007275 IEA multicellular organismal development
GO:0008152 IEA:IDA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IDA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172954 LCLAT1 lysocardiolipin acyltransferase 1 protein_coding Homo_sapiens

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