C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: defensin beta 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054763 Defb42 10090 + 14:63046991-63058149 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067990 Defb42-001 63046991-63048610 protein_coding
  ENSMUST00000111203 Defb42-002 63047094-63048558 protein_coding
  ENSMUST00000138708 Defb42-004 63055073-63056940 processed_transcript
  ENSMUST00000142140 Defb42-003 63047029-63058149 processed_transcript
  ENSMUST00000186438 Defb42-005 63048229-63048575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067990ENSMUST00000111203ENSMUST00000138708ENSMUST00000142140ENSMUST00000186438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067990 1.263±0.67 N/A 0.050±0.00 N/A N/A N/A N/A 2.780±0.33 N/A N/A 0.106±0.00 0.603±0.24 N/A 8.312±0.33
ENSMUST00000111203 0.135±0.03 N/A 0.047±0.00 N/A 0.406±0.01 N/A N/A 0.809±0.00 N/A N/A 0.110±0.05 0.210±0.12 N/A 0.307±0.00
ENSMUST00000138708 0.074±0.00 0.393±0.30 0.018±0.00 0.093±0.00 0.199±0.00 0.260±0.17 0.042±0.02 N/A 0.067±0.05 0.131±0.06 N/A 0.417±0.21 N/A 0.105±0.00
ENSMUST00000142140 0.033±0.00 0.054±0.02 0.007±0.00 0.028±0.01 N/A 0.056±0.00 0.030±0.01 N/A 0.012±0.01 0.082±0.05 N/A 0.073±0.04 0.016±0.00 0.062±0.00
ENSMUST00000186438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.10 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PQ CIL_0007PQ_0002 VISTA 14:62762164-63363066
CIL_000919 CIL_000919_0002 VISTA 14:62906721-63507169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000205884 DEFB136 defensin, beta 136 protein_coding Homo_sapiens

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