C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tensin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055322 Tns1 10090 - 1:73910231-74124449 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000169786 Tns1-201 73910231-74124447 protein_coding
  ENSMUST00000185264 Tns1-017 73925417-73930811 processed_transcript
  ENSMUST00000185331 Tns1-004 73914117-73995372 protein_coding
  ENSMUST00000185529 Tns1-018 73925630-73930505 processed_transcript
  ENSMUST00000185702 Tns1-020 73914093-73995372 protein_coding
  ENSMUST00000186381 Tns1-013 73990374-74016422 processed_transcript
  ENSMUST00000187281 Tns1-011 73993163-74037133 protein_coding
  ENSMUST00000187584 Tns1-001 73910232-74091351 protein_coding
  ENSMUST00000187691 Tns1-007 73913911-73928513 protein_coding
  ENSMUST00000188208 Tns1-009 73997055-74096868 protein_coding
  ENSMUST00000188436 Tns1-005 73994793-73997695 retained_intron
  ENSMUST00000188942 Tns1-003 73980640-73987063 retained_intron
  ENSMUST00000189228 Tns1-021 73925130-73941014 protein_coding
  ENSMUST00000189571 Tns1-015 73992100-73998468 processed_transcript
  ENSMUST00000190389 Tns1-014 73992205-74001567 protein_coding
  ENSMUST00000190599 Tns1-012 74002316-74037157 processed_transcript
  ENSMUST00000191104 Tns1-008 73910232-74124449 protein_coding
  ENSMUST00000191204 Tns1-010 73995288-74096825 protein_coding
  ENSMUST00000191264 Tns1-002 73989722-73998468 retained_intron
  ENSMUST00000191367 Tns1-016 73953373-73963043 protein_coding
  ENSMUST00000191527 Tns1-019 73925417-73928217 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169786ENSMUST00000185331ENSMUST00000187584ENSMUST00000187691ENSMUST00000191104
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169786 N/A N/A 25.061±0.00 N/A N/A N/A 15.255±5.52 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185331 N/A N/A N/A N/A N/A 18.385±4.21 N/A N/A N/A N/A N/A 8.140±1.28 N/A N/A
ENSMUST00000187584 10.400±3.25 15.260±0.00 N/A 0.451±0.21 N/A N/A N/A 10.579±0.00 1.770±0.26 31.027±0.00 N/A 10.272±4.64 7.589±4.74 N/A
ENSMUST00000187691 N/A N/A N/A N/A 33.690±0.50 17.396±0.00 N/A N/A 2.217±0.42 93.003±27.45 N/A N/A 20.700±7.79 115.771±12.79
ENSMUST00000191104 42.530±17.17 31.697±11.90 30.521±0.00 1.295±1.26 17.774±9.02 N/A 16.372±3.50 26.166±13.37 2.272±0.83 40.707±0.00 8.470±3.47 11.303±1.56 6.230±0.95 9.602±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005MB CIL_0005MB_0002 CGP 1:73910231-74148223

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 TAS actin binding
GO:0005925 ISO focal adhesion
GO:0007044 IMP cell-substrate junction assembly
GO:0010761 IMP fibroblast migration
GO:0030055 IDA cell-substrate junction
GO:0035556 IEA intracellular signal transduction
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020845 tns1 tensin 1 protein_coding Danio_rerio
ENSDARG00000078842 TNS1 (2 of 2) tensin 1 protein_coding Danio_rerio
ENSG00000079308 TNS1 tensin 1 protein_coding Homo_sapiens

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