C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4933400A11 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055357 4933400A11Rik 10090 - X:169776257-169779635 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068874 4933400A11Rik-001 169776378-169779635 protein_coding
  ENSMUST00000068894 4933400A11Rik-003 169776257-169779592 protein_coding
  ENSMUST00000112102 4933400A11Rik-002 169776425-169779557 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000068874ENSMUST00000068894ENSMUST00000112102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000068874 N/A N/A N/A N/A 0.122±0.00 0.169±0.10 N/A N/A N/A N/A 8.221±2.43
ENSMUST00000068894 N/A N/A 0.012±0.00 N/A N/A N/A 0.007±0.00 N/A N/A 0.013±0.00 1.554±0.68
ENSMUST00000112102 0.095±0.02 0.249±0.01 N/A 0.056±0.02 0.059±0.00 0.226±0.00 0.011±0.00 0.071±0.00 0.020±0.00 0.012±0.01 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008290 IEA F-actin capping protein complex
GO:0030036 IEA actin cytoskeleton organization
GO:0051693 IEA actin filament capping
GO:0071203 IEA WASH complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000116489 CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 protein_coding Homo_sapiens

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