C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cathepsin R
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055679 Ctsr 10090 - 13:61159214-61164256 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021889 Ctsr-201 61159214-61164256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverPlacentaTestisENSMUST00000021889
Transcript ID Brain Liver Placenta Testis
ENSMUST00000021889 0.022±0.00 0.007±0.00 281.790±236.26 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W7 CIL_0000W7_000B CGP 13:61035027-61164256
CIL_0000W7 CIL_0000W7_000G CGP 13:61159214-61203410

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005764 ISA lysosome
GO:0006508 IEA proteolysis
GO:0008234 ISA cysteine-type peptidase activity
GO:0030163 ISA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011701 ctsll cathepsin L, like protein_coding Danio_rerio
ENSDARG00000039173 ctslb cathepsin Lb protein_coding Danio_rerio
ENSDARG00000074306 ctslb cathepsin Lb protein_coding Danio_rerio
ENSDARG00000075527 si:dkey-269i1.3 si:dkey-269i1.3 protein_coding Danio_rerio
ENSDARG00000079376 zgc:174153 zgc:174153 protein_coding Danio_rerio
ENSDARG00000087651 ctslb cathepsin Lb protein_coding Danio_rerio
ENSDARG00000089750 si:dkey-26g8.5 si:dkey-26g8.5 protein_coding Danio_rerio
ENSDARG00000089806 si:dkey-239j18.3 si:dkey-239j18.3 protein_coding Danio_rerio
ENSDARG00000090918 si:dkey-269i1.4 si:dkey-269i1.4 protein_coding Danio_rerio
ENSDARG00000094559 zgc:174855 zgc:174855 protein_coding Danio_rerio
ENSDARG00000095072 si:dkey-26g8.4 si:dkey-26g8.4 protein_coding Danio_rerio
ENSDARG00000095254 si:dkey-239j18.2 si:dkey-239j18.2 protein_coding Danio_rerio
ENSDARG00000095744 si:dkey-269i1.4 si:dkey-269i1.4 protein_coding Danio_rerio

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