C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055762 Eef1d 10090 - 15:75894796-75909556 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023235 Eef1d-015 75895804-75909329 protein_coding
  ENSMUST00000055220 Eef1d-004 75898106-75909319 retained_intron
  ENSMUST00000089680 Eef1d-005 75895490-75909319 protein_coding
  ENSMUST00000089681 Eef1d-002 75895490-75909335 protein_coding
  ENSMUST00000109972 Eef1d-006 75894800-75909334 protein_coding
  ENSMUST00000109975 Eef1d-201 75894800-75909340 protein_coding
  ENSMUST00000116440 Eef1d-013 75895488-75909297 protein_coding
  ENSMUST00000123712 Eef1d-008 75896394-75909547 protein_coding
  ENSMUST00000127550 Eef1d-003 75903262-75905363 protein_coding
  ENSMUST00000129800 Eef1d-017 75896676-75901255 retained_intron
  ENSMUST00000134222 Eef1d-011 75895492-75896740 retained_intron
  ENSMUST00000137426 Eef1d-012 75895488-75903556 protein_coding
  ENSMUST00000141268 Eef1d-010 75896281-75909319 protein_coding
  ENSMUST00000141475 Eef1d-009 75903123-75909547 protein_coding
  ENSMUST00000144614 Eef1d-007 75896274-75909556 protein_coding
  ENSMUST00000145764 Eef1d-014 75903506-75909291 protein_coding
  ENSMUST00000151066 Eef1d-016 75895488-75909306 protein_coding
  ENSMUST00000154584 Eef1d-001 75894796-75909355 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023235ENSMUST00000055220ENSMUST00000089680ENSMUST00000089681ENSMUST00000109972ENSMUST00000116440ENSMUST00000127550ENSMUST00000137426ENSMUST00000141268ENSMUST00000144614ENSMUST00000151066ENSMUST00000154584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023235 27.403±18.36 N/A 53.649±3.08 25.035±0.00 8.492±0.00 N/A 22.445±0.34 12.979±2.93 75.192±50.00 17.236±6.81 19.252±5.13 52.987±19.90 67.020±30.69 84.162±0.00
ENSMUST00000055220 N/A N/A N/A N/A 1.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000089680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.308±2.36 N/A N/A N/A
ENSMUST00000089681 N/A N/A N/A 21.667±8.19 N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.188±8.32
ENSMUST00000109972 N/A N/A N/A N/A N/A N/A N/A N/A 25.346±2.82 N/A N/A N/A N/A N/A
ENSMUST00000116440 18.811±9.78 14.684±2.69 44.599±6.55 N/A 21.518±5.41 28.238±4.75 14.867±4.04 20.226±1.47 62.882±55.27 21.826±1.74 18.264±5.75 39.656±16.87 59.261±32.11 N/A
ENSMUST00000127550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 183.416±0.00
ENSMUST00000137426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.513±0.00 N/A 47.122±10.64
ENSMUST00000141268 20.425±8.62 N/A N/A 25.976±3.35 15.076±6.09 14.780±0.29 43.689±7.86 17.047±3.47 52.826±58.11 16.512±3.21 N/A 51.716±0.00 54.258±22.71 N/A
ENSMUST00000144614 12.957±0.00 20.448±2.90 N/A N/A 27.639±6.41 25.211±2.80 N/A 19.132±1.63 10.107±2.01 17.978±4.95 N/A 59.304±13.71 61.527±0.00 N/A
ENSMUST00000151066 N/A N/A N/A 26.786±0.00 N/A N/A 17.074±0.00 N/A N/A N/A N/A 86.205±33.45 78.345±39.82 202.680±0.00
ENSMUST00000154584 8.490±0.00 N/A N/A 12.192±0.00 1.488±0.00 N/A N/A 3.955±0.00 22.211±0.00 N/A N/A 15.387±7.19 20.755±9.97 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0003C6 CIL_0003C6_0002 CGP 15:75890964-75909556

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003746 IEA translation elongation factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005853 IEA eukaryotic translation elongation factor 1 complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006414 IEA translational elongation
GO:0007165 IEA signal transduction
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030053 eef1db elongation factor-1, delta, b protein_coding Danio_rerio
ENSG00000104529 EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein_coding Homo_sapiens

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