C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selection and upkeep of intraepithelial T cells 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055960 Skint4 10090 + 4:112072016-112168076 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000069769 Skint4-001 112072639-112167396 protein_coding
  ENSMUST00000106564 Skint4-002 112081470-112168076 protein_coding
  ENSMUST00000106565 Skint4-003 112072016-112167386 protein_coding
  ENSMUST00000106566 Skint4-201 112081470-112168076 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastMusclePlacentaTestisENSMUST00000069769ENSMUST00000106565ENSMUST00000106566
Transcript ID Bladder Brain Breast Muscle Placenta Testis
ENSMUST00000069769 N/A N/A N/A N/A N/A 0.014±0.00
ENSMUST00000106565 0.018±0.00 0.002±0.00 0.182±0.11 0.006±0.00 0.006±0.00 0.022±0.01
ENSMUST00000106566 0.044±0.00 N/A 0.034±0.00 0.007±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XH CIL_0000XH_000G CGP 4:112006269-112168076
CIL_0000XH CIL_0000XH_000C CGP 4:112072016-112300468

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004109 CR846080.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000039257 si:ch73-137d22.1 si:ch73-137d22.1 protein_coding Danio_rerio
ENSDARG00000056798 zgc:123297 zgc:123297 protein_coding Danio_rerio
ENSDARG00000079170 zgc:162154 zgc:162154 protein_coding Danio_rerio

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