C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: triple QxxK/R motif containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055963 Triqk 10090 + 4:12906838-12983553 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000143186 Triqk-002 12906838-12980873 protein_coding
  ENSMUST00000156536 Triqk-003 12917967-12981070 processed_transcript
  ENSMUST00000183345 Triqk-001 12906858-12983553 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143186ENSMUST00000156536ENSMUST00000183345
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143186 1.015±0.52 0.621±0.00 1.873±0.00 2.484±1.09 0.486±0.00 1.277±0.13 0.373±0.13 0.989±0.41 0.124±0.06 1.030±0.53 0.124±0.06 0.886±0.69 0.842±0.64 1.290±0.21
ENSMUST00000156536 N/A 0.557±0.00 N/A N/A 0.460±0.06 0.398±0.00 N/A N/A 0.095±0.04 0.237±0.00 0.178±0.05 1.541±0.22 0.501±0.23 0.455±0.00
ENSMUST00000183345 0.357±0.18 0.272±0.06 0.596±0.19 0.438±0.15 0.321±0.26 0.346±0.21 0.298±0.07 0.401±0.06 0.058±0.02 0.389±0.00 0.057±0.01 0.457±0.29 0.147±0.09 0.429±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O2 CIL_0007O2_0004 UCNEbase 4:12306673-14026114
CIL_00015G CIL_00015G_0002 CGP 4:12906838-13893649

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076296 triqk triple QxxK/R motif containing protein_coding Danio_rerio
ENSG00000205133 TRIQK triple QxxK/R motif containing protein_coding Homo_sapiens

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