C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700008F21 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056018 1700008F21Rik 10090 + 8:129067134-129183732 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026912 1700008F21Rik-003 129067223-129183730 protein_coding
  ENSMUST00000108744 1700008F21Rik-004 129118041-129183732 processed_transcript
  ENSMUST00000108745 1700008F21Rik-005 129067134-129183731 protein_coding
  ENSMUST00000140887 1700008F21Rik-001 129067140-129167009 nonsense_mediated_decay
  ENSMUST00000148234 1700008F21Rik-006 129067205-129183673 nonsense_mediated_decay
  ENSMUST00000148621 1700008F21Rik-002 129133702-129167011 processed_transcript
  ENSMUST00000189055 1700008F21Rik-007 129144116-129183732 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026912ENSMUST00000108744ENSMUST00000140887ENSMUST00000148234ENSMUST00000189055
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.575±0.00
ENSMUST00000108744 N/A N/A 0.161±0.00 N/A N/A N/A N/A N/A 0.050±0.00 N/A 57.380±0.00
ENSMUST00000140887 N/A N/A 0.203±0.00 N/A N/A 0.014±0.01 N/A N/A N/A 0.018±0.00 22.388±22.79
ENSMUST00000148234 0.049±0.00 0.012±0.00 0.109±0.00 0.134±0.07 0.054±0.02 0.054±0.04 0.066±0.01 0.044±0.00 0.107±0.05 0.063±0.04 2.895±0.00
ENSMUST00000189055 N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 0.063±0.00 0.098±0.00 74.636±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000216937 CCDC7 coiled-coil domain containing 7 protein_coding Homo_sapiens

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