C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056091 St3gal5 10090 + 6:72097592-72154571 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000069994 St3gal5-001 72097592-72154571 protein_coding
  ENSMUST00000114112 St3gal5-002 72097623-72154571 protein_coding
  ENSMUST00000187007 St3gal5-003 72097757-72147150 processed_transcript
  ENSMUST00000188366 St3gal5-004 72115232-72142271 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069994ENSMUST00000114112ENSMUST00000188366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069994 4.250±1.94 112.397±22.25 9.623±0.24 24.480±19.20 4.098±0.92 1.755±0.45 13.263±2.46 3.119±0.71 64.102±45.89 16.172±1.38 24.801±2.76 64.530±24.80 7.739±4.34 10.962±2.79
ENSMUST00000114112 1.152±0.42 47.226±20.72 1.417±0.18 1.944±0.49 0.699±0.06 0.550±0.08 N/A 0.582±0.05 25.878±5.23 2.400±0.26 N/A 54.027±3.74 1.125±0.13 1.501±0.19
ENSMUST00000188366 N/A N/A N/A 65.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0005SY CIL_0005SY_0002 CGP 6:72097592-72235577

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006486 IEA protein glycosylation
GO:0030173 IEA integral component of Golgi membrane
GO:0047291 ISS lactosylceramide alpha-2,3-sialyltransferase activity
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037556 st3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein_coding Danio_rerio
ENSG00000115525 ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein_coding Homo_sapiens

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