C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, T region locus 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056116 H2-T22 10090 - 17:36037128-36042747 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058801 H2-T22-003 36038407-36042690 protein_coding
  ENSMUST00000077960 H2-T22-002 36038409-36042747 protein_coding
  ENSMUST00000080015 H2-T22-001 36038409-36042705 protein_coding
  ENSMUST00000172633 H2-T22-004 36037128-36042500 retained_intron
  ENSMUST00000173280 H2-T22-005 36038409-36042683 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058801ENSMUST00000077960ENSMUST00000080015ENSMUST00000172633ENSMUST00000173280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058801 11.284±0.52 16.261±1.95 N/A N/A 14.558±6.86 11.815±2.39 2.307±0.00 5.520±1.05 12.357±3.19 6.371±0.00 2.888±0.54 8.206±1.48 N/A 0.584±0.00
ENSMUST00000077960 17.582±6.04 N/A 25.151±7.55 0.787±0.00 9.164±1.81 7.381±4.17 2.332±0.34 11.905±4.39 9.501±6.73 8.887±1.33 2.507±0.74 9.052±4.33 2.191±0.99 0.441±0.15
ENSMUST00000080015 11.093±1.86 10.119±4.00 7.333±0.26 0.610±0.00 14.111±5.03 6.198±1.90 2.777±0.79 5.752±1.04 6.167±4.20 8.088±1.18 1.515±0.40 8.902±2.49 1.400±0.40 0.119±0.00
ENSMUST00000172633 4.793±0.54 3.886±0.41 4.560±0.68 1.464±0.30 6.375±1.21 3.353±0.38 0.680±0.00 2.333±0.25 1.501±1.14 4.241±0.84 0.657±0.12 3.272±0.69 1.191±0.95 0.149±0.05
ENSMUST00000173280 3.732±0.00 N/A N/A 1.018±0.00 10.233±3.58 4.080±0.74 1.720±0.00 4.136±0.37 N/A 4.937±1.63 N/A 6.160±2.17 1.879±0.61 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex

Homologs

No Homologs available.

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