C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carnosine dipeptidase 1 (metallopeptidase M20 family)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056162 Cndp1 10090 - 18:84610509-84650084 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070139 Cndp1-001 84610509-84650084 protein_coding
  ENSMUST00000130579 Cndp1-003 84630859-84649946 retained_intron
  ENSMUST00000145981 Cndp1-002 84628691-84650046 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070139ENSMUST00000130579ENSMUST00000145981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070139 0.196±0.14 N/A 0.011±0.01 0.023±0.02 0.043±0.02 0.027±0.00 4.537±0.61 0.007±0.01 N/A 0.016±0.00 0.551±0.42 0.197±0.11 0.017±0.01
ENSMUST00000130579 0.101±0.06 0.048±0.02 N/A 0.029±0.00 0.012±0.00 N/A N/A 0.055±0.04 0.041±0.00 0.011±0.00 0.158±0.08 0.009±0.00 0.020±0.01
ENSMUST00000145981 1.029±0.18 N/A 0.012±0.00 0.021±0.00 0.105±0.08 0.060±0.00 4.632±0.19 0.037±0.00 N/A N/A 1.443±0.61 0.101±0.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088P CIL_00088P_0002 VISTA 18:84072054-84673645
CIL_0008EA CIL_0008EA_0002 VISTA 18:84113592-84715865
CIL_0008CN CIL_0008CN_0002 VISTA 18:84163338-84766317
CIL_0008E7 CIL_0008E7_0002 VISTA 18:84241674-84843351
CIL_0008E6 CIL_0008E6_0002 VISTA 18:84247222-84848063

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004180 IEA carboxypeptidase activity
GO:0005829 ISO cytosol
GO:0006508 ISO proteolysis
GO:0008237 IEA metallopeptidase activity
GO:0016805 ISO dipeptidase activity
GO:0034701 IEA tripeptidase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069583 CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family) protein_coding Danio_rerio
ENSG00000150656 CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family) protein_coding Homo_sapiens

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