C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor coactivator 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056234 Ncoa4 10090 + 14:32159865-32179855 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111994 Ncoa4-003 32165791-32179247 protein_coding
  ENSMUST00000163336 Ncoa4-001 32159865-32179855 protein_coding
  ENSMUST00000164341 Ncoa4-008 32166121-32172622 protein_coding
  ENSMUST00000168034 Ncoa4-006 32165792-32172695 protein_coding
  ENSMUST00000168114 Ncoa4-007 32165792-32172399 protein_coding
  ENSMUST00000168334 Ncoa4-002 32165589-32179855 nonsense_mediated_decay
  ENSMUST00000168385 Ncoa4-005 32159981-32176126 protein_coding
  ENSMUST00000169722 Ncoa4-004 32159938-32176241 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111994ENSMUST00000163336ENSMUST00000164341ENSMUST00000168334ENSMUST00000168385ENSMUST00000169722
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111994 3.704±0.74 0.786±0.00 13.399±10.51 7.331±5.15 2.300±1.48 1.637±1.13 1.052±0.00 3.772±0.93 21.607±26.15 1.561±0.43 N/A 3.968±2.71 7.609±6.70 N/A
ENSMUST00000163336 1.672±0.25 1.254±0.27 1.654±0.26 2.312±0.12 1.395±0.45 1.599±0.58 0.713±0.00 2.209±1.26 1.879±0.66 1.551±0.55 0.593±0.13 2.165±0.58 2.180±1.20 N/A
ENSMUST00000164341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 84.113±0.00
ENSMUST00000168334 N/A 0.844±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168385 17.541±1.53 15.332±3.56 9.687±2.69 5.390±1.25 22.014±10.37 9.706±0.68 9.232±1.08 12.662±2.44 23.149±12.99 8.952±2.00 5.760±1.77 16.599±6.49 19.886±0.41 21.950±2.15
ENSMUST00000169722 7.888±2.16 2.026±0.05 6.892±0.00 5.900±0.59 4.081±0.90 3.120±0.56 3.787±0.77 5.125±0.91 13.673±10.49 4.409±0.71 2.493±1.12 3.807±1.93 11.926±5.39 6.997±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021439 ncoa4 nuclear receptor coactivator 4 protein_coding Danio_rerio
ENSG00000266412 NCOA4 nuclear receptor coactivator 4 protein_coding Homo_sapiens

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