C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class N
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056536 Pign 10090 - 1:105518422-105663677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070699 Pign-201 105518422-105659008 protein_coding
  ENSMUST00000185209 Pign-009 105659178-105663672 retained_intron
  ENSMUST00000185983 Pign-004 105646629-105663676 retained_intron
  ENSMUST00000186195 Pign-011 105628328-105638261 protein_coding
  ENSMUST00000186485 Pign-001 105518426-105663662 protein_coding
  ENSMUST00000187537 Pign-003 105552630-105663643 protein_coding
  ENSMUST00000187909 Pign-008 105658259-105663673 retained_intron
  ENSMUST00000188858 Pign-010 105646783-105649651 retained_intron
  ENSMUST00000190139 Pign-006 105521146-105569165 processed_transcript
  ENSMUST00000190811 Pign-002 105556806-105663662 protein_coding
  ENSMUST00000190945 Pign-007 105521137-105568948 processed_transcript
  ENSMUST00000191408 Pign-005 105646629-105663677 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070699ENSMUST00000185209ENSMUST00000186485ENSMUST00000190139ENSMUST00000190811ENSMUST00000190945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070699 N/A N/A 1.189±0.37 1.387±0.58 0.613±0.09 N/A 0.442±0.00 N/A 0.823±0.00 N/A 0.347±0.10 1.978±0.70 1.194±0.05 0.761±0.00
ENSMUST00000185209 N/A N/A N/A N/A N/A 7.411±0.00 7.110±0.00 8.943±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000186485 2.483±0.79 1.869±0.38 3.336±0.71 1.638±0.01 1.536±0.65 2.470±0.70 1.202±0.14 1.989±0.19 2.226±0.85 3.981±0.47 0.540±0.16 3.198±1.81 3.212±1.48 2.419±0.25
ENSMUST00000190139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.487±1.29
ENSMUST00000190811 N/A 1.330±0.00 N/A N/A 1.699±0.00 N/A N/A N/A N/A N/A N/A 2.053±0.72 N/A 2.170±1.01
ENSMUST00000190945 0.926±0.32 1.515±0.13 1.536±0.49 1.230±0.36 1.102±0.31 1.447±0.31 0.473±0.10 0.753±0.20 1.117±0.37 1.604±0.38 N/A 1.953±0.65 1.249±0.00 4.153±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FF CIL_0007FF_0002 CGP 1:105276914-105663677
CIL_00055U CIL_00055U_0002 CGP 1:105518422-105755191

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016020 IEA membrane
GO:0016780 TAS phosphotransferase activity, for other substituted phosphate groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077532 pign phosphatidylinositol glycan anchor biosynthesis, class N protein_coding Danio_rerio
ENSG00000197563 PIGN phosphatidylinositol glycan anchor biosynthesis, class N protein_coding Homo_sapiens

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