C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700017N19 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056912 1700017N19Rik 10090 + 10:100590511-100618401 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041162 1700017N19Rik-001 100592385-100618391 protein_coding
  ENSMUST00000186825 1700017N19Rik-003 100592381-100618391 nonsense_mediated_decay
  ENSMUST00000187119 1700017N19Rik-004 100592350-100618312 protein_coding
  ENSMUST00000188736 1700017N19Rik-002 100592370-100618397 protein_coding
  ENSMUST00000188930 1700017N19Rik-008 100590511-100603367 protein_coding
  ENSMUST00000190386 1700017N19Rik-006 100592396-100618314 protein_coding
  ENSMUST00000190708 1700017N19Rik-007 100592408-100618401 protein_coding
  ENSMUST00000191033 1700017N19Rik-005 100609155-100618309 protein_coding
  ENSMUST00000191336 1700017N19Rik-009 100592376-100612517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000041162ENSMUST00000190386ENSMUST00000191033ENSMUST00000191336
Transcript ID Brain Placenta Testis
ENSMUST00000041162 N/A N/A 43.452±5.01
ENSMUST00000190386 0.010±0.00 N/A 48.171±0.00
ENSMUST00000191033 N/A N/A 36.832±0.00
ENSMUST00000191336 N/A 0.041±0.00 44.786±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165805 C12orf50 chromosome 12 open reading frame 50 protein_coding Homo_sapiens

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