C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-glucuronate decarboxylase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057363 Uxs1 10090 - 1:43746966-43827800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076997 Uxs1-002 43749512-43827741 nonsense_mediated_decay
  ENSMUST00000126008 Uxs1-001 43746966-43827800 protein_coding
  ENSMUST00000128261 Uxs1-004 43790631-43827774 protein_coding
  ENSMUST00000134860 Uxs1-005 43774866-43827762 processed_transcript
  ENSMUST00000136179 Uxs1-008 43771730-43827016 processed_transcript
  ENSMUST00000136704 Uxs1-006 43780118-43827762 nonsense_mediated_decay
  ENSMUST00000139451 Uxs1-003 43765007-43827800 protein_coding
  ENSMUST00000153317 Uxs1-007 43771730-43827750 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076997ENSMUST00000126008ENSMUST00000128261ENSMUST00000134860ENSMUST00000136704ENSMUST00000139451
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076997 8.677±1.90 9.537±1.45 12.017±5.11 4.435±0.00 4.945±0.79 6.792±0.56 2.044±0.22 7.924±4.62 2.804±1.17 5.168±2.05 2.754±0.37 12.400±3.34 14.658±5.70 8.022±0.95
ENSMUST00000126008 0.668±0.24 1.174±0.00 2.162±0.29 1.738±1.04 0.461±0.00 0.861±0.00 0.181±0.04 1.060±0.00 0.350±0.07 0.672±0.03 0.481±0.07 1.059±0.28 N/A 1.022±0.00
ENSMUST00000128261 N/A 11.087±1.80 N/A N/A N/A N/A N/A N/A N/A 4.699±0.00 N/A N/A N/A N/A
ENSMUST00000134860 N/A N/A N/A 159.896±0.00 N/A N/A N/A N/A N/A N/A N/A 129.040±0.00 161.785±0.00 N/A
ENSMUST00000136704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 236.396±171.19 43.670±0.00
ENSMUST00000139451 7.854±1.76 15.054±2.54 N/A 36.380±0.00 6.556±1.89 5.944±0.62 2.500±0.55 13.860±0.78 2.972±0.83 4.474±1.02 2.255±0.23 14.669±7.84 40.810±22.65 10.631±4.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y8 CIL_0003Y8_0002 CGP 1:43730602-43827800

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005794 IEA Golgi apparatus
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0033320 IEA UDP-D-xylose biosynthetic process
GO:0042803 IEA protein homodimerization activity
GO:0048040 IEA UDP-glucuronate decarboxylase activity
GO:0050662 IEA coenzyme binding
GO:0051262 IEA protein tetramerization
GO:0070062 IEA extracellular vesicular exosome
GO:0070403 IEA NAD+ binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056102 uxs1 UDP-glucuronic acid decarboxylase 1 protein_coding Danio_rerio
ENSG00000115652 UXS1 UDP-glucuronate decarboxylase 1 protein_coding Homo_sapiens

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