C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057375 Yipf1 10090 + 4:107314363-107359823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075693 Yipf1-001 107314363-107359822 protein_coding
  ENSMUST00000124254 Yipf1-007 107318971-107359823 processed_transcript
  ENSMUST00000124650 Yipf1-005 107314437-107319016 protein_coding
  ENSMUST00000128284 Yipf1-009 107314412-107345067 protein_coding
  ENSMUST00000128507 Yipf1-008 107324655-107336502 processed_transcript
  ENSMUST00000137391 Yipf1-003 107343111-107351589 processed_transcript
  ENSMUST00000139527 Yipf1-004 107314384-107350472 protein_coding
  ENSMUST00000140162 Yipf1-002 107314369-107321439 processed_transcript
  ENSMUST00000143106 Yipf1-010 107344554-107359822 processed_transcript
  ENSMUST00000146829 Yipf1-011 107315763-107344678 processed_transcript
  ENSMUST00000155975 Yipf1-006 107315132-107315837 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075693ENSMUST00000128284ENSMUST00000139527ENSMUST00000143106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075693 26.594±2.77 12.874±5.39 24.285±3.99 11.834±3.42 17.737±1.07 61.888±5.40 9.451±0.85 27.517±2.05 15.819±5.18 19.419±4.89 3.829±0.57 23.105±9.44 14.827±6.14 14.441±6.29
ENSMUST00000128284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.159±0.00 1.859±0.00
ENSMUST00000139527 N/A N/A N/A N/A 6.221±0.00 N/A N/A N/A N/A N/A 1.136±0.00 9.736±0.73 N/A N/A
ENSMUST00000143106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.185±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030133 IEA transport vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014474 yipf1 Yip1 domain family, member 1 protein_coding Danio_rerio
ENSG00000058799 YIPF1 Yip1 domain family, member 1 protein_coding Homo_sapiens

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