C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: echinoderm microtubule associated protein like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058070 Eml1 10090 + 12:108370957-108539617 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054955 Eml1-001 108410542-108539575 protein_coding
  ENSMUST00000109857 Eml1-002 108410662-108538392 protein_coding
  ENSMUST00000109860 Eml1-003 108422816-108539564 protein_coding
  ENSMUST00000123035 Eml1-008 108534869-108539617 processed_transcript
  ENSMUST00000130999 Eml1-004 108423078-108537532 nonsense_mediated_decay
  ENSMUST00000138456 Eml1-005 108370957-108508538 retained_intron
  ENSMUST00000148186 Eml1-007 108534811-108537427 processed_transcript
  ENSMUST00000155544 Eml1-006 108471853-108539564 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054955ENSMUST00000109857ENSMUST00000109860ENSMUST00000123035ENSMUST00000130999ENSMUST00000138456ENSMUST00000155544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054955 12.718±0.21 N/A 29.890±9.77 6.045±3.33 5.998±0.00 6.783±0.56 8.688±1.88 1.095±0.00 0.208±0.12 8.178±2.07 5.946±0.00 13.000±0.63 2.458±0.51 0.508±0.18
ENSMUST00000109857 N/A N/A 22.176±8.10 N/A N/A N/A N/A N/A N/A N/A 16.032±4.75 N/A 1.170±0.00 N/A
ENSMUST00000109860 21.607±12.89 2.142±0.61 13.864±0.89 8.754±3.76 6.036±0.91 6.098±1.72 3.307±0.79 5.019±0.83 0.925±0.43 9.454±2.39 N/A 15.146±6.37 2.424±1.78 0.760±0.17
ENSMUST00000123035 N/A 5.064±0.76 35.144±13.94 7.463±0.00 4.827±0.69 13.238±0.57 8.127±2.48 N/A 0.495±0.13 N/A 19.841±2.63 9.349±3.31 2.849±0.43 0.152±0.00
ENSMUST00000130999 N/A 6.118±0.84 N/A N/A 2.269±0.00 3.615±0.00 N/A N/A 0.275±0.05 5.912±0.00 N/A 15.192±4.71 N/A 0.342±0.12
ENSMUST00000138456 N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.02 N/A N/A 7.692±0.76 N/A 0.059±0.00
ENSMUST00000155544 N/A N/A N/A N/A 1.264±0.00 N/A N/A N/A 0.242±0.02 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0002 VISTA 12:107949271-108552884
CIL_0003HG CIL_0003HG_0002 CGP 12:108334377-108539617
CIL_0003HN CIL_0003HN_0002 CGP 12:108370957-108688513

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0005829 IDA cytosol
GO:0005874 IEA microtubule
GO:0007052 IMP mitotic spindle organization
GO:0007405 IMP neuroblast proliferation
GO:0007420 IMP brain development
GO:0008017 IDA microtubule binding
GO:0015631 ISS tubulin binding
GO:0097431 IMP mitotic spindle pole
GO:1990023 IMP mitotic spindle midzone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042840 eml1 echinoderm microtubule associated protein like 1 protein_coding Danio_rerio
ENSG00000066629 EML1 echinoderm microtubule associated protein like 1 protein_coding Homo_sapiens

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