C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058594 Fbxo18 10090 - 2:11742573-11777582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071564 Fbxo18-001 11742573-11777582 protein_coding
  ENSMUST00000114813 Fbxo18-002 11742573-11777541 protein_coding
  ENSMUST00000123717 Fbxo18-003 11747850-11777507 processed_transcript
  ENSMUST00000123723 Fbxo18-007 11751676-11758473 processed_transcript
  ENSMUST00000126543 Fbxo18-004 11764225-11777548 processed_transcript
  ENSMUST00000131893 Fbxo18-008 11748437-11757556 protein_coding
  ENSMUST00000136633 Fbxo18-009 11749455-11751766 processed_transcript
  ENSMUST00000139292 Fbxo18-011 11742573-11743651 processed_transcript
  ENSMUST00000151402 Fbxo18-006 11767630-11777507 processed_transcript
  ENSMUST00000151862 Fbxo18-005 11767193-11777532 processed_transcript
  ENSMUST00000155604 Fbxo18-010 11743667-11749229 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071564ENSMUST00000114813ENSMUST00000131893
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071564 23.102±1.01 16.737±2.80 16.567±1.86 24.889±8.66 18.655±3.02 14.496±4.02 15.495±1.14 20.392±3.07 6.127±2.24 13.463±2.98 5.126±1.55 15.091±4.40 14.081±2.37 4.549±1.13
ENSMUST00000114813 4.567±0.16 6.288±1.93 3.599±0.00 N/A 5.229±0.00 4.163±0.48 N/A 2.797±0.15 1.385±0.08 N/A 1.432±0.34 8.088±0.03 4.686±1.74 1.320±0.21
ENSMUST00000131893 N/A N/A N/A 77.066±0.00 N/A N/A N/A N/A N/A N/A N/A 114.607±0.00 78.583±8.73 17.177±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0032508 IEA DNA duplex unwinding
GO:0072429 IMP response to intra-S DNA damage checkpoint signaling
GO:1902231 IEA positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062983 fbxo18 F-box protein, helicase, 18 protein_coding Danio_rerio
ENSG00000134452 FBXO18 F-box protein, helicase, 18 protein_coding Homo_sapiens

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