C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kielin/chordin-like protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059022 Kcp 10090 - 6:29473162-29507952 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078112 Kcp-201 29482037-29507952 protein_coding
  ENSMUST00000091391 Kcp-002 29482036-29507937 nonsense_mediated_decay
  ENSMUST00000101614 Kcp-001 29482037-29507950 protein_coding
  ENSMUST00000159479 Kcp-003 29482036-29495914 nonsense_mediated_decay
  ENSMUST00000159482 Kcp-004 29473162-29484144 nonsense_mediated_decay
  ENSMUST00000160181 Kcp-006 29497930-29502824 nonsense_mediated_decay
  ENSMUST00000161237 Kcp-005 29502290-29507952 nonsense_mediated_decay
  ENSMUST00000161276 Kcp-009 29482036-29484860 nonsense_mediated_decay
  ENSMUST00000161655 Kcp-008 29483693-29484972 retained_intron
  ENSMUST00000162959 Kcp-007 29496845-29498608 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078112ENSMUST00000091391ENSMUST00000101614ENSMUST00000159479ENSMUST00000159482ENSMUST00000160181ENSMUST00000161276ENSMUST00000162959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078112 N/A 0.450±0.13 N/A 3.829±0.00 N/A N/A N/A 0.648±0.00 N/A 0.491±0.00 N/A 1.333±0.00 0.306±0.00 0.388±0.00
ENSMUST00000091391 1.505±0.70 0.384±0.07 0.194±0.00 3.374±0.22 N/A 1.519±0.00 0.319±0.04 0.650±0.14 0.275±0.06 0.413±0.00 0.182±0.00 1.554±0.74 0.284±0.28 0.317±0.07
ENSMUST00000101614 1.664±0.17 0.466±0.14 0.363±0.00 2.339±0.00 1.037±0.18 0.715±0.26 0.442±0.06 0.925±0.16 0.268±0.14 0.601±0.26 0.184±0.00 2.072±0.60 0.446±0.29 N/A
ENSMUST00000159479 N/A 0.374±0.00 N/A 0.044±0.00 0.544±0.00 0.978±0.00 N/A 0.780±0.00 0.344±0.09 N/A 0.608±0.17 2.003±0.21 0.233±0.04 N/A
ENSMUST00000159482 N/A N/A N/A 0.047±0.00 N/A N/A N/A 0.827±0.12 N/A N/A N/A 0.257±0.00 0.194±0.00 N/A
ENSMUST00000160181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A
ENSMUST00000161276 5.381±0.00 N/A N/A N/A N/A N/A 1.197±0.20 7.028±0.36 1.043±0.25 N/A 0.593±0.05 N/A 0.591±0.00 N/A
ENSMUST00000162959 N/A N/A N/A N/A 0.970±0.00 N/A N/A N/A N/A N/A N/A 1.248±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0030513 IDA positive regulation of BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078508 KCP kielin/chordin-like protein protein_coding Danio_rerio
ENSG00000135253 KCP kielin/chordin-like protein protein_coding Homo_sapiens

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