C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H2A histone family, member J
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060032 H2afj 10090 + 6:136808244-136810070 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074556 H2afj-001 136808244-136810070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074556 43.593±7.11 171.852±16.34 48.951±12.05 8.209±4.85 62.137±41.53 141.518±17.12 8.112±5.08 64.049±40.59 34.165±17.21 69.066±38.82 2.547±0.46 90.652±46.71 9.357±6.21 7.636±4.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HB CIL_0003HB_0002 CGP 6:136808244-136828233

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068995 zgc:101846 zgc:101846 protein_coding Danio_rerio
ENSDARG00000070286 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000074260 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000075220 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000075379 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000076507 protein_coding Danio_rerio
ENSDARG00000086552 protein_coding Danio_rerio
ENSDARG00000086604 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000087451 protein_coding Danio_rerio
ENSDARG00000088291 protein_coding Danio_rerio
ENSDARG00000088686 protein_coding Danio_rerio
ENSDARG00000091205 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSG00000246705 H2AFJ H2A histone family, member J protein_coding Homo_sapiens

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